BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020G04LP1|AL427662
(1004 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1257 1255 0.0
3x_Contig919 657 0.0
>3x_Contig1257
Length = 4889
Score = 1255 bits (632), Expect = 0.0
Identities = 657/666 (98%), Gaps = 1/666 (0%)
Strand = Plus / Minus
Query: 337 gttatcttttcgtcttgctcttctcaatctaccagatggtgctggcctcaatttcggtgc 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4889 gttatcttttcgtcttgctcttctcaatctaccagatggtgctggcctcaatttcggtgc 4830
Query: 397 cggtgggtagaatgatttatagcttgaattacgcaaattcattatgttattagatcctac 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4829 cggtgggtagaatgatttatagcttgaattacgcaaattcattatgttattagatcctac 4770
Query: 457 tgggacaccatttgctctwkttccagcagacataggtccaccagtttgtggagtgtttac 516
|||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 4769 tgggacaccattcgctccagtaccagcagacataggtccaccagtttgtggagtgtttac 4710
Query: 517 aaacggcgatccaactaacagatgactcggcaacagtgtaatcccataaacaggatcaaa 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4709 aaacggcgatccaactaacagatgactcggcaacagtgtaatcccataaacaggatcaaa 4650
Query: 577 tggagtctgaggaatactaactgttccaggaatacttcctggtatagaacctggcataga 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4649 tggagtctgaggaatactaactgttccaggaatacttcctggtatagaacctggcataga 4590
Query: 637 accaccacgatgtgtgttatatatatactgcggtggatggtgattcgatccaccatttct 696
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4589 accaccacgatgtgtgtaatatatatactgcggtggatggtgattcgatccaccatttct 4530
Query: 697 tcctgccacatcgtagacctgttgttcgtaaccaacaggcggtctcccatatatcagaga 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4529 tcctgccacatcgtagacctgttgttcgtaaccaacaggcggtctcccatatatcagaga 4470
Query: 757 aggctgataatgattagccgatgttcccgaattcattgggtttatgtatgcacggtttgt 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4469 aggctgataatgattagccgatgttcccgaattcattgggtttatgtatgcacggtttgt 4410
Query: 817 ttcttcttcaacgtttcaaattctttaattccacaaacattcaactcccctcaacaatgc 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4409 ttcttcttcaacgtttcaaattctttaattccacaaacattcaactcccctcaacaatgc 4350
Query: 877 tgccaaaaataatgcgatgtactattatcttgttatccacaattgtagaacaccaaatat 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4349 tgccaaaaataatgcgatgtactattatcttgttatccacaattgtagaacaccaaatat 4290
Query: 937 ccgaatcgttgggaatcttgactttaattcttcctcaatcagaagtwccc-caacacaaa 995
|||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 4289 ccgaatcgttggaaatcttgactttaattcttcctcaatcagaagtacccacaacacaaa 4230
Query: 996 caaagg 1001
||||||
Sbjct: 4229 caaagg 4224
>3x_Contig919
Length = 4576
Score = 657 bits (331), Expect = 0.0
Identities = 354/362 (97%), Gaps = 1/362 (0%)
Strand = Plus / Plus
Query: 1 gatcaagtnaatgctttctattgggtaattttttgcaactttttgtaagaactcgacaat 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4206 gatcaagtaaatgctttctattgggtaattttttgcaactttttgtaagaactcgacaat 4265
Query: 61 atctagctcagaattaacatttgtaaaaagcaacgatctgcttctataagtatcattccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4266 atctagctcagaattaacatttgtaaaaagcaacgatctgcttctataagtatcattccc 4325
Query: 121 cttaggtagaatgctatattggaattggattttcaattcagaatcgatagtctttcgtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4326 cttaggtagaatgctatattggaattggattttcaattcagaatcgatagtctttcgtat 4385
Query: 181 tgatttgggacccgagctgccagacatggaacctgatgtggaagctgaaaaagattgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4386 tgatttgggacccgagctgccagacatggaacctgatgtggaagctgaaaaagattgaga 4445
Query: 241 tctagatgcagatctagagctgtaacctctttcaacatcatattctgcttccactttgtt 300
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 4446 tctagatgcagatctagagctgntacctctttc-acatcatattctgcttccactttgtt 4504
Query: 301 attgtcacgagaatgttctcgttgttgctggggtttgttatcttttcgtcttgctcttct 360
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 4505 attgtcacgagaatgttctcgttgttgctggnngttgntatcttttcgtcttgctcttct 4564
Query: 361 ca 362
||
Sbjct: 4565 ca 4566
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7741
Number of Sequences: 1807
Number of extensions: 7741
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 2
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)